Mukesh Kumar bagged three wickets as India won by 6 runs in the fifth T20I.
In a low-scoring thriller, the Indian women fought hard until the end but paid the price for poor batting.
Kerala were home and dry in the 20th over in their pursuit of a modest 117.
Australia's chief selector stressed the need to ensure there was no hangover from the departure of such an influential individual.
India defeated Australia by 20 runs in the fourth T20I to take an unassailable 3-1 lead in the five-match series.
Left-arm spinner Taijul Islam was pick of the Bangladesh bowlers with a match haul of 10 wickets.
India won by 20 runs after restricting the visitors to 154/7 in Raipur.
The Kerala all-rounder will be part of India's squad for a three-match T20I series to be played at the Wankhede in Mumbai.
Wong went ballistic on a turning track at the Wankhede Stadium, scoring her last 23 runs off only seven balls.
Ganguly said Rohit and Kohli deserved rest so that they come back 'fresh' for the hectic calendar ahead.