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Defence PRO Athul Pillai said that divers were unable to search the deep waters due to strong currents.
The authorities asked the volunteer team, including Ranjith Israel and others, to go back, stating that only the Indian Army was needed at the site.
Kozhikode MP M K Raghavan reached Shirur on Monday morning.
NIT team continues search using GPR; land filled with mud, water poses challenge
The rights panel issued notices to district collector and corporation secretary, directing them to submit a detailed report on the incident within a week.
Mayor Arya Rajendran told media that water would be pumped through the manhole and part of the canal near Power House would be examined.
Despite the improvement, several major rivers, including the Brahmaputra, continue to flow above the danger level, and rain is forecasted in isolated areas.
The building collapsed in the Pal area in Surat City. Rescue operations ongoing.
Among the districts, Kottayam recorded the highest rainfall at 103 mm.
NDRF teams will be deployed in Idukki, Pathanamthitta, Alappuzha, Ernakulam, Malappuram, Kollam, Kozhikode, Thrissur and Wayanad.