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The 38-year-old made his international debut in 2010 in an ODI against Australia.
Sri Lanka have won the three-match series 2-0 after one ended in a tie.
Once skipper Rohit was dismissed by Vandersay, the Indians lost their way.
Richa Ghosh's 96 went in vain as the visitors won by three runs.
Australia got over the line with 21 balls and six wickets to spare with none of the Indian bowlers able to make any impact.
India will start their World Cup campaign against five-time champions Australia at Chennai on October 8.
The off-spinner is back in contention for a place in India's World Cup squad.
In a deciding Super Four contest, the hosts won by 2 wickets.
The pacer will be replaced by 22-year-old Zaman Khan, who has yet to make his ODI debut.
Kaur has been penalised for two offences during India's third ODI against Bangladesh on Saturday.